
@inproceedings{
	map-reduce,
	title = "MapReduce: Simplified Data Processing on Large Cluster",
	author = "Jeffrey Dean and Sanjay Ghemawat",
	booktitle = "Operating Systems Design and Implementation",
	year = "2004"
}


@inproceedings{bioportal,
       title="Development of User-friendly Supercomputing Portal in Bio Research Field",
       author="Hiroaki Yuasa and Takeshi Iwasaki and Motoyoshi Kurokawa and Takayuki Shigetani and Tsuyoshi Horiki and Ryutaro Himeno",
       year="2005",
       booktitle="First International Conference on e-Science and Grid Computing"

}

@article{
	condorinpractice,
        author="Douglas Thain and Todd Tannenbaum and Miron Livny",
        title="Distributed computing in practice: the Condor experience",
        journal = "Concurrency: Practice and Experience",
        volume="17",
        pages="323--356",
        year="2005"
}

@article{
	chem-eln,
        title="The status of electronic laboratory notbooks for chemistry and biology",
	author="Keith T Taylor",
	year="2006",
	journal="Current Opinion in Drug Discovery and Development",
	pages="348--353",
	volume="9",
	issue="3"
}

@article{
	blast,
	author="Stephen F. Altschul and Warren Gish and Webb Miller and Eugene W. Myers and David J. Lipman",
	title="Basic local alignment search tool",
	year="1990",
	journal="Journal of Molecular Biology",
	volume="215",
	issue="3"
}

@inproceedings{
	datablast,
	author="Heshan Lin and Xiaosong Ma and Praveen Chandramohan and Al Geist and Nagiza Samatova",
	title="Efficient Data Access for Parallel BLAST",
	booktitle="IEEE International Parallel and Distributed Processing Symposium",
	year="2005"
}

@techreport{
	chirp,
	author = "Douglas Thain and Christopher Moretti and Jeffrey Hemmes",
	title = "Chirp: A Practical Global Filesystem for Cluster and Grid Computing",
	institution = "Journal of Grid Computing",
        volume="7",
        issue="1",
        page="51",
        year="2009"
}

%todo:really a book chapter
@article{threecomp,
	title="Three Complementary Approaches to Parallelization of Local BLAST Service on Workstation Clusters",
	author="R.C. Braun and K.T. Pedretti and T.L. Casavant and T.E. Scheetz and C.L. Birkett and C.A. Roberts",
	volume="1662",
	year="1999",
	booktitle="Parallel Computing Technologies"
}

@inproceedings{
        parrot,
        title = "Parrot: Transparent User-Level Middleware for Data-Intensive Computing",
        author = "Douglas Thain and Miron Livny",
        booktitle = "Proceedings of the Workshop on Adaptive Grid Middleware",
        address = "New Orleans",
        month = "September",
        year = "2003",
}


@article{folding,
title="Folding@Home and Genome@Home:Using distributed computing to tackle previously intractable problems in computational biology",
author="Stefan M. Larson and Christopher D. Snow and Michael Shirts and Vijay S. Pande"

}
%stanford



@article{seti,
title="SETI@home An Experiment in Public-Resource Computing",
author="David P. Anderson and Jeff Cobb and Eric Korpela and Matt Lebofsky and Dan Werthimer",
journal="Communications of the ACM",
year="2002",
volume="45",
number="11",
month="November"

}

@inproceedings{blastgrid,
title="Performance Characterization of BLAST for the Grid",
author="Enis Afgan and Purushotham Bangalore",
year="2007",
pages="1394--398",
booktitle="Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering"
}

@article{spolsky-leaky,
author="Joel Spolsky",
title="The Law of Leaky Abstractions",
year="2002",
month="April",
url="http://www.joelonsoftware.com/articles/LeakyAbstractions.html"
}

@misc{genbank,
	title="Growth of GenBank",
	author="NCBI",
	howpublished="\url{http://www.ncbi.nlm.nih.gov/Genbank/genbankstats.html}",
	year="2009",
	month="February"
}
